Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc4Q8CG47 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smc4Q8CG47 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Smc4Q8CG47 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Smc4Q8CG47 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Smc4Q8CG47 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Smc4Q8CG47 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.2■■□□□ 1.79
Smc4Q8CG47 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
Smc4Q8CG47 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc4Q8CG47 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc4Q8CG47 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc4Q8CG47 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smc4Q8CG47 Gm22238-201ENSMUST00000175222 88 ntBASIC26.18■■□□□ 1.78
Smc4Q8CG47 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc4Q8CG47 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.17■■□□□ 1.78
Smc4Q8CG47 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Smc4Q8CG47 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc4Q8CG47 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc4Q8CG47 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc4Q8CG47 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc4Q8CG47 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc4Q8CG47 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
Smc4Q8CG47 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.15■■□□□ 1.78
Smc4Q8CG47 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Smc4Q8CG47 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.15■■□□□ 1.78
Smc4Q8CG47 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Smc4Q8CG47 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Smc4Q8CG47 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smc4Q8CG47 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Smc4Q8CG47 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc4Q8CG47 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc4Q8CG47 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Smc4Q8CG47 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Smc4Q8CG47 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smc4Q8CG47 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smc4Q8CG47 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Smc4Q8CG47 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.13■■□□□ 1.77
Smc4Q8CG47 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc4Q8CG47 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Smc4Q8CG47 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Smc4Q8CG47 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Smc4Q8CG47 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Smc4Q8CG47 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Smc4Q8CG47 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Smc4Q8CG47 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.1■■□□□ 1.77
Smc4Q8CG47 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Smc4Q8CG47 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Smc4Q8CG47 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc4Q8CG47 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smc4Q8CG47 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Smc4Q8CG47 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Smc4Q8CG47 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Smc4Q8CG47 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Smc4Q8CG47 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smc4Q8CG47 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc4Q8CG47 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc4Q8CG47 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smc4Q8CG47 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Smc4Q8CG47 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Smc4Q8CG47 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Smc4Q8CG47 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Smc4Q8CG47 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.04■■□□□ 1.76
Smc4Q8CG47 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms