Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.85■□□□□ 0.93
Rnf222Q8CEF8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.84■□□□□ 0.93
Rnf222Q8CEF8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf222Q8CEF8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rnf222Q8CEF8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf222Q8CEF8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf222Q8CEF8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf222Q8CEF8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf222Q8CEF8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf222Q8CEF8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf222Q8CEF8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf222Q8CEF8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf222Q8CEF8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf222Q8CEF8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf222Q8CEF8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rnf222Q8CEF8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rnf222Q8CEF8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rnf222Q8CEF8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf222Q8CEF8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.77■□□□□ 0.91
Rnf222Q8CEF8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf222Q8CEF8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf222Q8CEF8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Gm12922-201ENSMUST00000120626 809 ntBASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf222Q8CEF8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf222Q8CEF8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Gm9847-201ENSMUST00000052528 599 ntBASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf222Q8CEF8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf222Q8CEF8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf222Q8CEF8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms