Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Ptcd1Q8C2E4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ptcd1Q8C2E4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ptcd1Q8C2E4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptcd1Q8C2E4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 Gm18284-201ENSMUST00000172604 624 ntBASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptcd1Q8C2E4 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ptcd1Q8C2E4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.2■■□□□ 1.78
Ptcd1Q8C2E4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptcd1Q8C2E4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptcd1Q8C2E4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptcd1Q8C2E4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ptcd1Q8C2E4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Ptcd1Q8C2E4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptcd1Q8C2E4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.16■■□□□ 1.78
Ptcd1Q8C2E4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptcd1Q8C2E4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptcd1Q8C2E4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ptcd1Q8C2E4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptcd1Q8C2E4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.14■■□□□ 1.78
Ptcd1Q8C2E4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Ptcd1Q8C2E4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptcd1Q8C2E4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptcd1Q8C2E4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Ptcd1Q8C2E4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ptcd1Q8C2E4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ptcd1Q8C2E4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ptcd1Q8C2E4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ptcd1Q8C2E4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
Ptcd1Q8C2E4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.12■■□□□ 1.77
Ptcd1Q8C2E4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.12■■□□□ 1.77
Ptcd1Q8C2E4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ptcd1Q8C2E4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptcd1Q8C2E4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Ptcd1Q8C2E4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptcd1Q8C2E4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ptcd1Q8C2E4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ptcd1Q8C2E4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Ptcd1Q8C2E4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Ptcd1Q8C2E4 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.09■■□□□ 1.77
Ptcd1Q8C2E4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.09■■□□□ 1.77
Ptcd1Q8C2E4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ptcd1Q8C2E4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Ptcd1Q8C2E4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptcd1Q8C2E4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms