Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm12366-201ENSMUST00000121722 873 ntBASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Gm5786-201ENSMUST00000085368 882 ntBASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps9d1Q8C190 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps9d1Q8C190 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps9d1Q8C190 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps9d1Q8C190 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps9d1Q8C190 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps9d1Q8C190 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps9d1Q8C190 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Gm27502-201ENSMUST00000183495 199 ntBASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps9d1Q8C190 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps9d1Q8C190 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps9d1Q8C190 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vps9d1Q8C190 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.61■□□□□ 0.73
Vps9d1Q8C190 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms