Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lcmt2Q8BYR1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lcmt2Q8BYR1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lcmt2Q8BYR1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lcmt2Q8BYR1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lcmt2Q8BYR1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lcmt2Q8BYR1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lcmt2Q8BYR1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Lcmt2Q8BYR1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lcmt2Q8BYR1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lcmt2Q8BYR1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lcmt2Q8BYR1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Lcmt2Q8BYR1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lcmt2Q8BYR1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lcmt2Q8BYR1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lcmt2Q8BYR1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lcmt2Q8BYR1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lcmt2Q8BYR1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Lcmt2Q8BYR1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lcmt2Q8BYR1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lcmt2Q8BYR1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms