Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SprnQ8BWU1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SprnQ8BWU1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SprnQ8BWU1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SprnQ8BWU1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SprnQ8BWU1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SprnQ8BWU1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SprnQ8BWU1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Gm45364-201ENSMUST00000210883 159 ntBASIC18.75■□□□□ 0.59
SprnQ8BWU1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.75■□□□□ 0.59
SprnQ8BWU1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SprnQ8BWU1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Scarna2-201ENSMUST00000157560 414 ntBASIC18.74■□□□□ 0.59
SprnQ8BWU1 Mir3960-201ENSMUST00000198213 73 ntBASIC18.74■□□□□ 0.59
SprnQ8BWU1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SprnQ8BWU1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SprnQ8BWU1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.73■□□□□ 0.59
SprnQ8BWU1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SprnQ8BWU1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.72■□□□□ 0.59
SprnQ8BWU1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SprnQ8BWU1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SprnQ8BWU1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SprnQ8BWU1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SprnQ8BWU1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SprnQ8BWU1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SprnQ8BWU1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.7■□□□□ 0.58
SprnQ8BWU1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SprnQ8BWU1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.7■□□□□ 0.58
SprnQ8BWU1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SprnQ8BWU1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SprnQ8BWU1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SprnQ8BWU1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.69■□□□□ 0.58
SprnQ8BWU1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SprnQ8BWU1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.68■□□□□ 0.58
SprnQ8BWU1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SprnQ8BWU1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
SprnQ8BWU1 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.68■□□□□ 0.58
SprnQ8BWU1 Gm16437-201ENSMUST00000025669 507 ntBASIC18.68■□□□□ 0.58
SprnQ8BWU1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SprnQ8BWU1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SprnQ8BWU1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SprnQ8BWU1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SprnQ8BWU1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SprnQ8BWU1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SprnQ8BWU1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.66■□□□□ 0.58
SprnQ8BWU1 Gm9806-201ENSMUST00000051080 552 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms