Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Fam43aQ8BUP8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam43aQ8BUP8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Gm7332-201ENSMUST00000118351 454 ntBASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam43aQ8BUP8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam43aQ8BUP8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Fam43aQ8BUP8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam43aQ8BUP8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam43aQ8BUP8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Fam43aQ8BUP8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Fam43aQ8BUP8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Fam43aQ8BUP8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam43aQ8BUP8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Fam43aQ8BUP8 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam43aQ8BUP8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.15■■□□□ 1.3
Fam43aQ8BUP8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms