Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdk5rap1Q8BTW8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdk5rap1Q8BTW8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Gm22238-201ENSMUST00000175222 88 ntBASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdk5rap1Q8BTW8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdk5rap1Q8BTW8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdk5rap1Q8BTW8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdk5rap1Q8BTW8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cdk5rap1Q8BTW8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdk5rap1Q8BTW8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdk5rap1Q8BTW8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cdk5rap1Q8BTW8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdk5rap1Q8BTW8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdk5rap1Q8BTW8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdk5rap1Q8BTW8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk5rap1Q8BTW8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdk5rap1Q8BTW8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk5rap1Q8BTW8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cdk5rap1Q8BTW8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk5rap1Q8BTW8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk5rap1Q8BTW8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk5rap1Q8BTW8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdk5rap1Q8BTW8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdk5rap1Q8BTW8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk5rap1Q8BTW8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk5rap1Q8BTW8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk5rap1Q8BTW8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Cdk5rap1Q8BTW8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk5rap1Q8BTW8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cdk5rap1Q8BTW8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdk5rap1Q8BTW8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdk5rap1Q8BTW8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdk5rap1Q8BTW8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.01■□□□□ 0.79
Cdk5rap1Q8BTW8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap1Q8BTW8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cdk5rap1Q8BTW8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk5rap1Q8BTW8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.01■□□□□ 0.79
Cdk5rap1Q8BTW8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdk5rap1Q8BTW8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdk5rap1Q8BTW8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap1Q8BTW8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cdk5rap1Q8BTW8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk5rap1Q8BTW8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms