Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpne3Q8BT60 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Gm7332-201ENSMUST00000118351 454 ntBASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpne3Q8BT60 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cpne3Q8BT60 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpne3Q8BT60 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpne3Q8BT60 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cpne3Q8BT60 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cpne3Q8BT60 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpne3Q8BT60 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpne3Q8BT60 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpne3Q8BT60 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.31■□□□□ 0.84
Cpne3Q8BT60 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne3Q8BT60 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpne3Q8BT60 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne3Q8BT60 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne3Q8BT60 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne3Q8BT60 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.27■□□□□ 0.84
Cpne3Q8BT60 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.27■□□□□ 0.84
Cpne3Q8BT60 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne3Q8BT60 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne3Q8BT60 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpne3Q8BT60 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.26■□□□□ 0.83
Cpne3Q8BT60 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne3Q8BT60 Mir6538-201ENSMUST00000183713 110 ntBASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cpne3Q8BT60 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne3Q8BT60 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms