Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nhlrc1Q8BR37 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nhlrc1Q8BR37 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.33■□□□□ 0.2
Nhlrc1Q8BR37 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nhlrc1Q8BR37 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nhlrc1Q8BR37 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nhlrc1Q8BR37 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Gm9847-201ENSMUST00000052528 599 ntBASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhlrc1Q8BR37 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhlrc1Q8BR37 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhlrc1Q8BR37 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Gm12922-201ENSMUST00000120626 809 ntBASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhlrc1Q8BR37 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nhlrc1Q8BR37 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nhlrc1Q8BR37 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nhlrc1Q8BR37 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nhlrc1Q8BR37 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nhlrc1Q8BR37 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nhlrc1Q8BR37 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms