Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Smco3Q8BQM7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Gm22567-201ENSMUST00000175542 342 ntBASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Smco3Q8BQM7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smco3Q8BQM7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smco3Q8BQM7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Gm4799-201ENSMUST00000095396 657 ntBASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco3Q8BQM7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco3Q8BQM7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
Smco3Q8BQM7 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.28■□□□□ 0.36
Smco3Q8BQM7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.27■□□□□ 0.36
Smco3Q8BQM7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smco3Q8BQM7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smco3Q8BQM7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smco3Q8BQM7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.27■□□□□ 0.36
Smco3Q8BQM7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smco3Q8BQM7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
Smco3Q8BQM7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.27■□□□□ 0.35
Smco3Q8BQM7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco3Q8BQM7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco3Q8BQM7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms