Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smg1Q8BKX6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smg1Q8BKX6 Gm10399-202ENSMUST00000202768 748 ntBASIC18.32■□□□□ 0.52
Smg1Q8BKX6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smg1Q8BKX6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smg1Q8BKX6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smg1Q8BKX6 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smg1Q8BKX6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smg1Q8BKX6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.28■□□□□ 0.52
Smg1Q8BKX6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.27■□□□□ 0.52
Smg1Q8BKX6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smg1Q8BKX6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smg1Q8BKX6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smg1Q8BKX6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Gm43017-201ENSMUST00000198296 752 ntBASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smg1Q8BKX6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
Smg1Q8BKX6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smg1Q8BKX6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smg1Q8BKX6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smg1Q8BKX6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smg1Q8BKX6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smg1Q8BKX6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smg1Q8BKX6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smg1Q8BKX6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smg1Q8BKX6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms