Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3bQ8BHK2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3bQ8BHK2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Scn3bQ8BHK2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn3bQ8BHK2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn3bQ8BHK2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn3bQ8BHK2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn3bQ8BHK2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn3bQ8BHK2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scn3bQ8BHK2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn3bQ8BHK2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Mir3960-201ENSMUST00000198213 73 ntBASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scn3bQ8BHK2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Scn3bQ8BHK2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Scn3bQ8BHK2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.58■□□□□ 0.73
Scn3bQ8BHK2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn3bQ8BHK2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Scn3bQ8BHK2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn3bQ8BHK2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn3bQ8BHK2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn3bQ8BHK2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Scn3bQ8BHK2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.55■□□□□ 0.72
Scn3bQ8BHK2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn3bQ8BHK2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn3bQ8BHK2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Gm6821-201ENSMUST00000107540 542 ntBASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn3bQ8BHK2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn3bQ8BHK2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Scn3bQ8BHK2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Scn3bQ8BHK2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Scn3bQ8BHK2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn3bQ8BHK2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn3bQ8BHK2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms