Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf187Q8BFX1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf187Q8BFX1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Rnf187Q8BFX1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf187Q8BFX1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.56■■□□□ 1.2
Rnf187Q8BFX1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf187Q8BFX1 Gm14523-201ENSMUST00000117260 558 ntBASIC22.55■■□□□ 1.2
Rnf187Q8BFX1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.55■■□□□ 1.2
Rnf187Q8BFX1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rnf187Q8BFX1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.55■■□□□ 1.2
Rnf187Q8BFX1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.54■■□□□ 1.2
Rnf187Q8BFX1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf187Q8BFX1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf187Q8BFX1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Gm27502-201ENSMUST00000183495 199 ntBASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rnf187Q8BFX1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf187Q8BFX1 Gm22567-201ENSMUST00000175542 342 ntBASIC22.52■■□□□ 1.2
Rnf187Q8BFX1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf187Q8BFX1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf187Q8BFX1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Rnf187Q8BFX1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf187Q8BFX1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf187Q8BFX1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf187Q8BFX1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf187Q8BFX1 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Gm7332-201ENSMUST00000118351 454 ntBASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf187Q8BFX1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf187Q8BFX1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf187Q8BFX1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf187Q8BFX1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf187Q8BFX1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf187Q8BFX1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Gm12366-201ENSMUST00000121722 873 ntBASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Gm5786-201ENSMUST00000085368 882 ntBASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf187Q8BFX1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf187Q8BFX1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf187Q8BFX1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf187Q8BFX1 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf187Q8BFX1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms