Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox21Q811W0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox21Q811W0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox21Q811W0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.27■□□□□ 0.36
Sox21Q811W0 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.27■□□□□ 0.36
Sox21Q811W0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox21Q811W0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox21Q811W0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.26■□□□□ 0.35
Sox21Q811W0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox21Q811W0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox21Q811W0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox21Q811W0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox21Q811W0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox21Q811W0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox21Q811W0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox21Q811W0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox21Q811W0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox21Q811W0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.24■□□□□ 0.35
Sox21Q811W0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox21Q811W0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.24■□□□□ 0.35
Sox21Q811W0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.24■□□□□ 0.35
Sox21Q811W0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox21Q811W0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Sox21Q811W0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.23■□□□□ 0.35
Sox21Q811W0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox21Q811W0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.22■□□□□ 0.35
Sox21Q811W0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Sox21Q811W0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sox21Q811W0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox21Q811W0 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.22■□□□□ 0.35
Sox21Q811W0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox21Q811W0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox21Q811W0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox21Q811W0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.21■□□□□ 0.35
Sox21Q811W0 Gm7417-201ENSMUST00000192950 473 ntBASIC17.21■□□□□ 0.35
Sox21Q811W0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox21Q811W0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sox21Q811W0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox21Q811W0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sox21Q811W0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.2■□□□□ 0.34
Sox21Q811W0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.2■□□□□ 0.34
Sox21Q811W0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox21Q811W0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox21Q811W0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sox21Q811W0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox21Q811W0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.19■□□□□ 0.34
Sox21Q811W0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.19■□□□□ 0.34
Sox21Q811W0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox21Q811W0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox21Q811W0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Sox21Q811W0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox21Q811W0 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.18■□□□□ 0.34
Sox21Q811W0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.18■□□□□ 0.34
Sox21Q811W0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.18■□□□□ 0.34
Sox21Q811W0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox21Q811W0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox21Q811W0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Sox21Q811W0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox21Q811W0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms