Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ubp1Q811S7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ubp1Q811S7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubp1Q811S7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubp1Q811S7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubp1Q811S7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubp1Q811S7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubp1Q811S7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.81■□□□□ 0.92
Ubp1Q811S7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubp1Q811S7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.8■□□□□ 0.92
Ubp1Q811S7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubp1Q811S7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubp1Q811S7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ubp1Q811S7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubp1Q811S7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ubp1Q811S7 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.79■□□□□ 0.92
Ubp1Q811S7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ubp1Q811S7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubp1Q811S7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.78■□□□□ 0.92
Ubp1Q811S7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.78■□□□□ 0.92
Ubp1Q811S7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ubp1Q811S7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ubp1Q811S7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.77■□□□□ 0.92
Ubp1Q811S7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.76■□□□□ 0.91
Ubp1Q811S7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Ubp1Q811S7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubp1Q811S7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.75■□□□□ 0.91
Ubp1Q811S7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.75■□□□□ 0.91
Ubp1Q811S7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ubp1Q811S7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.75■□□□□ 0.91
Ubp1Q811S7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubp1Q811S7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubp1Q811S7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubp1Q811S7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.73■□□□□ 0.91
Ubp1Q811S7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.73■□□□□ 0.91
Ubp1Q811S7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubp1Q811S7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.73■□□□□ 0.91
Ubp1Q811S7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ubp1Q811S7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubp1Q811S7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubp1Q811S7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.72■□□□□ 0.91
Ubp1Q811S7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubp1Q811S7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms