Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ttc28Q80XJ3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ttc28Q80XJ3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ttc28Q80XJ3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.09■□□□□ 0.49
Ttc28Q80XJ3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc28Q80XJ3 Gm43137-201ENSMUST00000198052 594 ntBASIC18.08■□□□□ 0.49
Ttc28Q80XJ3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ttc28Q80XJ3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.08■□□□□ 0.48
Ttc28Q80XJ3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc28Q80XJ3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ttc28Q80XJ3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc28Q80XJ3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ttc28Q80XJ3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.07■□□□□ 0.48
Ttc28Q80XJ3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Mir7075-201ENSMUST00000184187 82 ntBASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ttc28Q80XJ3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.05■□□□□ 0.48
Ttc28Q80XJ3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Gm27011-201ENSMUST00000182352 972 ntBASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc28Q80XJ3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ttc28Q80XJ3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc28Q80XJ3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc28Q80XJ3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc28Q80XJ3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc28Q80XJ3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc28Q80XJ3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ttc28Q80XJ3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ttc28Q80XJ3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ttc28Q80XJ3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18■□□□□ 0.47
Ttc28Q80XJ3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc28Q80XJ3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc28Q80XJ3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms