Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk1Q80X41 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk1Q80X41 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Vrk1Q80X41 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Vrk1Q80X41 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vrk1Q80X41 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Vrk1Q80X41 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.2■□□□□ 0.82
Vrk1Q80X41 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.2■□□□□ 0.82
Vrk1Q80X41 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.2■□□□□ 0.82
Vrk1Q80X41 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vrk1Q80X41 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.19■□□□□ 0.82
Vrk1Q80X41 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk1Q80X41 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk1Q80X41 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.17■□□□□ 0.82
Vrk1Q80X41 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk1Q80X41 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.16■□□□□ 0.82
Vrk1Q80X41 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk1Q80X41 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vrk1Q80X41 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.15■□□□□ 0.82
Vrk1Q80X41 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vrk1Q80X41 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Vrk1Q80X41 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vrk1Q80X41 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vrk1Q80X41 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vrk1Q80X41 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk1Q80X41 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk1Q80X41 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vrk1Q80X41 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.13■□□□□ 0.81
Vrk1Q80X41 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk1Q80X41 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk1Q80X41 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk1Q80X41 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Gm12821-201ENSMUST00000120022 600 ntBASIC20.12■□□□□ 0.81
Vrk1Q80X41 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.12■□□□□ 0.81
Vrk1Q80X41 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.12■□□□□ 0.81
Vrk1Q80X41 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk1Q80X41 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.12■□□□□ 0.81
Vrk1Q80X41 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Golgb1-201ENSMUST00000023534 498 ntBASIC20.11■□□□□ 0.81
Vrk1Q80X41 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Vrk1Q80X41 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Vrk1Q80X41 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.1■□□□□ 0.81
Vrk1Q80X41 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vrk1Q80X41 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Vrk1Q80X41 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms