Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn4bQ7M729 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn4bQ7M729 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn4bQ7M729 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn4bQ7M729 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn4bQ7M729 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Scn4bQ7M729 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scn4bQ7M729 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn4bQ7M729 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn4bQ7M729 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.58■□□□□ 0.89
Scn4bQ7M729 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn4bQ7M729 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Scn4bQ7M729 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn4bQ7M729 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn4bQ7M729 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn4bQ7M729 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn4bQ7M729 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Scn4bQ7M729 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn4bQ7M729 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn4bQ7M729 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Scn4bQ7M729 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn4bQ7M729 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.54■□□□□ 0.88
Scn4bQ7M729 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn4bQ7M729 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn4bQ7M729 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn4bQ7M729 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Scn4bQ7M729 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn4bQ7M729 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Scn4bQ7M729 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn4bQ7M729 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn4bQ7M729 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn4bQ7M729 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn4bQ7M729 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn4bQ7M729 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn4bQ7M729 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.5■□□□□ 0.87
Scn4bQ7M729 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Scn4bQ7M729 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.5■□□□□ 0.87
Scn4bQ7M729 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.5■□□□□ 0.87
Scn4bQ7M729 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn4bQ7M729 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn4bQ7M729 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn4bQ7M729 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn4bQ7M729 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scn4bQ7M729 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn4bQ7M729 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn4bQ7M729 Gm5921-201ENSMUST00000075898 882 ntBASIC20.49■□□□□ 0.87
Scn4bQ7M729 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn4bQ7M729 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn4bQ7M729 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms