Protein–RNA interactions for Protein: Q6ZPY7

Kdm3b, Lysine-specific demethylase 3B, mousemouse

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3bQ6ZPY7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Kdm3bQ6ZPY7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm3bQ6ZPY7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm3bQ6ZPY7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm3bQ6ZPY7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Kdm3bQ6ZPY7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.4■■■□□ 2.62
Kdm3bQ6ZPY7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Kdm3bQ6ZPY7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Kdm3bQ6ZPY7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.39■■■□□ 2.62
Kdm3bQ6ZPY7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
Kdm3bQ6ZPY7 Golgb1-201ENSMUST00000023534 498 ntBASIC31.39■■■□□ 2.62
Kdm3bQ6ZPY7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Kdm3bQ6ZPY7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Kdm3bQ6ZPY7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm3bQ6ZPY7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Kdm3bQ6ZPY7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Kdm3bQ6ZPY7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Kdm3bQ6ZPY7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Kdm3bQ6ZPY7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Kdm3bQ6ZPY7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Kdm3bQ6ZPY7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.35■■■□□ 2.61
Kdm3bQ6ZPY7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Kdm3bQ6ZPY7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3bQ6ZPY7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm3bQ6ZPY7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC31.32■■■□□ 2.61
Kdm3bQ6ZPY7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Kdm3bQ6ZPY7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Kdm3bQ6ZPY7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 Gm12821-201ENSMUST00000120022 600 ntBASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kdm3bQ6ZPY7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Kdm3bQ6ZPY7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm3bQ6ZPY7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.3■■■□□ 2.6
Kdm3bQ6ZPY7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Kdm3bQ6ZPY7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Kdm3bQ6ZPY7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm3bQ6ZPY7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.27■■■□□ 2.6
Kdm3bQ6ZPY7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm3bQ6ZPY7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm3bQ6ZPY7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm3bQ6ZPY7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kdm3bQ6ZPY7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.26■■■□□ 2.6
Kdm3bQ6ZPY7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Kdm3bQ6ZPY7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Kdm3bQ6ZPY7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kdm3bQ6ZPY7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm3bQ6ZPY7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm3bQ6ZPY7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC31.25■■■□□ 2.59
Kdm3bQ6ZPY7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Kdm3bQ6ZPY7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
Kdm3bQ6ZPY7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Kdm3bQ6ZPY7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Kdm3bQ6ZPY7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
Kdm3bQ6ZPY7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Kdm3bQ6ZPY7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Kdm3bQ6ZPY7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Kdm3bQ6ZPY7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Kdm3bQ6ZPY7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms