Protein–RNA interactions for Protein: Q6PDH4

Ranbp3l, Ran-binding protein 3-like, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ranbp3lQ6PDH4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ranbp3lQ6PDH4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ranbp3lQ6PDH4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.77■□□□□ 0.59
Ranbp3lQ6PDH4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ranbp3lQ6PDH4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ranbp3lQ6PDH4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ranbp3lQ6PDH4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ranbp3lQ6PDH4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.73■□□□□ 0.59
Ranbp3lQ6PDH4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ranbp3lQ6PDH4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ranbp3lQ6PDH4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ranbp3lQ6PDH4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ranbp3lQ6PDH4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ranbp3lQ6PDH4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ranbp3lQ6PDH4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ranbp3lQ6PDH4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ranbp3lQ6PDH4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ranbp3lQ6PDH4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ranbp3lQ6PDH4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ranbp3lQ6PDH4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 206 ms