Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl3Q6P1Y1 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.89■■□□□ 1.09
Rtl3Q6P1Y1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl3Q6P1Y1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl3Q6P1Y1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtl3Q6P1Y1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl3Q6P1Y1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl3Q6P1Y1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtl3Q6P1Y1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rtl3Q6P1Y1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtl3Q6P1Y1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtl3Q6P1Y1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.87■■□□□ 1.09
Rtl3Q6P1Y1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtl3Q6P1Y1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtl3Q6P1Y1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rtl3Q6P1Y1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtl3Q6P1Y1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtl3Q6P1Y1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtl3Q6P1Y1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rtl3Q6P1Y1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtl3Q6P1Y1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.83■■□□□ 1.09
Rtl3Q6P1Y1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtl3Q6P1Y1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtl3Q6P1Y1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.81■■□□□ 1.08
Rtl3Q6P1Y1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.81■■□□□ 1.08
Rtl3Q6P1Y1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Rtl3Q6P1Y1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.81■■□□□ 1.08
Rtl3Q6P1Y1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtl3Q6P1Y1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtl3Q6P1Y1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtl3Q6P1Y1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtl3Q6P1Y1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.77■■□□□ 1.07
Rtl3Q6P1Y1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rtl3Q6P1Y1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rtl3Q6P1Y1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl3Q6P1Y1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl3Q6P1Y1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl3Q6P1Y1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.76■■□□□ 1.07
Rtl3Q6P1Y1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtl3Q6P1Y1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.75■■□□□ 1.07
Rtl3Q6P1Y1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms