Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.55■□□□□ 0.56
Frem1Q684R7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Frem1Q684R7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frem1Q684R7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frem1Q684R7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Frem1Q684R7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.54■□□□□ 0.56
Frem1Q684R7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frem1Q684R7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.53■□□□□ 0.56
Frem1Q684R7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frem1Q684R7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frem1Q684R7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Frem1Q684R7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.52■□□□□ 0.56
Frem1Q684R7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.52■□□□□ 0.56
Frem1Q684R7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Frem1Q684R7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Frem1Q684R7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Frem1Q684R7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.51■□□□□ 0.55
Frem1Q684R7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.51■□□□□ 0.55
Frem1Q684R7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.51■□□□□ 0.55
Frem1Q684R7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frem1Q684R7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Frem1Q684R7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Frem1Q684R7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Frem1Q684R7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Frem1Q684R7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Frem1Q684R7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.49■□□□□ 0.55
Frem1Q684R7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Frem1Q684R7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.49■□□□□ 0.55
Frem1Q684R7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Frem1Q684R7 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.48■□□□□ 0.55
Frem1Q684R7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Frem1Q684R7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Frem1Q684R7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Frem1Q684R7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Frem1Q684R7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Frem1Q684R7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Frem1Q684R7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Frem1Q684R7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.47■□□□□ 0.55
Frem1Q684R7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Frem1Q684R7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Frem1Q684R7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Frem1Q684R7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.47■□□□□ 0.55
Frem1Q684R7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Frem1Q684R7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Frem1Q684R7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Frem1Q684R7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Frem1Q684R7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Frem1Q684R7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Frem1Q684R7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Frem1Q684R7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Frem1Q684R7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Frem1Q684R7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Frem1Q684R7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Frem1Q684R7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Frem1Q684R7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.45■□□□□ 0.54
Frem1Q684R7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.45■□□□□ 0.54
Frem1Q684R7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.45■□□□□ 0.54
Frem1Q684R7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Frem1Q684R7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Frem1Q684R7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Frem1Q684R7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Frem1Q684R7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Frem1Q684R7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Frem1Q684R7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Frem1Q684R7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Frem1Q684R7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Frem1Q684R7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.42■□□□□ 0.54
Frem1Q684R7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.42■□□□□ 0.54
Frem1Q684R7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Frem1Q684R7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Frem1Q684R7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Frem1Q684R7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Frem1Q684R7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.41■□□□□ 0.54
Frem1Q684R7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Frem1Q684R7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.41■□□□□ 0.54
Frem1Q684R7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.41■□□□□ 0.54
Frem1Q684R7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Frem1Q684R7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Frem1Q684R7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Frem1Q684R7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Frem1Q684R7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms