Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc3Q64519 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sdc3Q64519 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.27■□□□□ 0.84
Sdc3Q64519 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc3Q64519 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc3Q64519 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc3Q64519 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.26■□□□□ 0.83
Sdc3Q64519 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sdc3Q64519 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc3Q64519 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc3Q64519 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.25■□□□□ 0.83
Sdc3Q64519 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc3Q64519 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.24■□□□□ 0.83
Sdc3Q64519 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sdc3Q64519 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc3Q64519 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc3Q64519 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc3Q64519 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Sdc3Q64519 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.23■□□□□ 0.83
Sdc3Q64519 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.23■□□□□ 0.83
Sdc3Q64519 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc3Q64519 Gm45102-201ENSMUST00000207427 857 ntBASIC20.23■□□□□ 0.83
Sdc3Q64519 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Sdc3Q64519 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc3Q64519 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc3Q64519 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
Sdc3Q64519 Notumos-201ENSMUST00000151998 2659 ntBASIC20.22■□□□□ 0.83
Sdc3Q64519 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.22■□□□□ 0.83
Sdc3Q64519 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sdc3Q64519 Etf1-202ENSMUST00000180351 108 ntBASIC20.22■□□□□ 0.83
Sdc3Q64519 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc3Q64519 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sdc3Q64519 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.21■□□□□ 0.83
Sdc3Q64519 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.21■□□□□ 0.83
Sdc3Q64519 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc3Q64519 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc3Q64519 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc3Q64519 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sdc3Q64519 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc3Q64519 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Sdc3Q64519 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.19■□□□□ 0.82
Sdc3Q64519 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sdc3Q64519 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdc3Q64519 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc3Q64519 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Sdc3Q64519 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc3Q64519 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sdc3Q64519 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc3Q64519 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc3Q64519 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdc3Q64519 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.18■□□□□ 0.82
Sdc3Q64519 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc3Q64519 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc3Q64519 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sdc3Q64519 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc3Q64519 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc3Q64519 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.17■□□□□ 0.82
Sdc3Q64519 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdc3Q64519 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.16■□□□□ 0.82
Sdc3Q64519 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.16■□□□□ 0.82
Sdc3Q64519 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdc3Q64519 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Sdc3Q64519 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdc3Q64519 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms