Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AtmQ62388 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AtmQ62388 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AtmQ62388 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AtmQ62388 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AtmQ62388 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AtmQ62388 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AtmQ62388 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AtmQ62388 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AtmQ62388 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AtmQ62388 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AtmQ62388 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AtmQ62388 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AtmQ62388 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
AtmQ62388 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
AtmQ62388 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AtmQ62388 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.51■□□□□ 0.87
AtmQ62388 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.51■□□□□ 0.87
AtmQ62388 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AtmQ62388 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AtmQ62388 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
AtmQ62388 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AtmQ62388 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AtmQ62388 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.51■□□□□ 0.87
AtmQ62388 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
AtmQ62388 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.5■□□□□ 0.87
AtmQ62388 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AtmQ62388 Gm43017-201ENSMUST00000198296 752 ntBASIC20.5■□□□□ 0.87
AtmQ62388 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
AtmQ62388 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.49■□□□□ 0.87
AtmQ62388 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AtmQ62388 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AtmQ62388 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
AtmQ62388 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AtmQ62388 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AtmQ62388 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AtmQ62388 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.47■□□□□ 0.87
AtmQ62388 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
AtmQ62388 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
AtmQ62388 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.47■□□□□ 0.87
AtmQ62388 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
AtmQ62388 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AtmQ62388 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AtmQ62388 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AtmQ62388 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.46■□□□□ 0.87
AtmQ62388 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
AtmQ62388 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AtmQ62388 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
AtmQ62388 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AtmQ62388 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.45■□□□□ 0.86
AtmQ62388 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.45■□□□□ 0.86
AtmQ62388 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.45■□□□□ 0.86
AtmQ62388 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AtmQ62388 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AtmQ62388 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
AtmQ62388 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.44■□□□□ 0.86
AtmQ62388 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
AtmQ62388 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
AtmQ62388 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.43■□□□□ 0.86
AtmQ62388 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AtmQ62388 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.42■□□□□ 0.86
AtmQ62388 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.42■□□□□ 0.86
AtmQ62388 Mir7075-201ENSMUST00000184187 82 ntBASIC20.42■□□□□ 0.86
AtmQ62388 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.42■□□□□ 0.86
AtmQ62388 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.42■□□□□ 0.86
AtmQ62388 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AtmQ62388 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AtmQ62388 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AtmQ62388 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AtmQ62388 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AtmQ62388 Gm37179-201ENSMUST00000194862 823 ntBASIC20.41■□□□□ 0.86
AtmQ62388 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AtmQ62388 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AtmQ62388 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.41■□□□□ 0.86
AtmQ62388 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.4■□□□□ 0.86
AtmQ62388 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Gm43137-201ENSMUST00000198052 594 ntBASIC20.4■□□□□ 0.86
AtmQ62388 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AtmQ62388 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.39■□□□□ 0.86
AtmQ62388 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
AtmQ62388 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AtmQ62388 Spcs1-204ENSMUST00000226782 949 ntBASIC20.39■□□□□ 0.85
AtmQ62388 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms