Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd47Q61735 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Cd47Q61735 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd47Q61735 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd47Q61735 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd47Q61735 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd47Q61735 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.16■□□□□ 0.66
Cd47Q61735 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd47Q61735 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.16■□□□□ 0.66
Cd47Q61735 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd47Q61735 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.15■□□□□ 0.66
Cd47Q61735 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd47Q61735 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd47Q61735 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cd47Q61735 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Cd47Q61735 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Gm7332-201ENSMUST00000118351 454 ntBASIC19.14■□□□□ 0.65
Cd47Q61735 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd47Q61735 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd47Q61735 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd47Q61735 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cd47Q61735 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd47Q61735 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd47Q61735 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cd47Q61735 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd47Q61735 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd47Q61735 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
Cd47Q61735 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.12■□□□□ 0.65
Cd47Q61735 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cd47Q61735 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd47Q61735 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd47Q61735 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd47Q61735 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.11■□□□□ 0.65
Cd47Q61735 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
Cd47Q61735 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd47Q61735 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd47Q61735 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd47Q61735 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd47Q61735 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.1■□□□□ 0.65
Cd47Q61735 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd47Q61735 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.1■□□□□ 0.65
Cd47Q61735 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.1■□□□□ 0.65
Cd47Q61735 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd47Q61735 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.1■□□□□ 0.65
Cd47Q61735 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd47Q61735 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.09■□□□□ 0.65
Cd47Q61735 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.09■□□□□ 0.65
Cd47Q61735 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Cd47Q61735 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cd47Q61735 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd47Q61735 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd47Q61735 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cd47Q61735 Mir6538-201ENSMUST00000183713 110 ntBASIC19.08■□□□□ 0.64
Cd47Q61735 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Cd47Q61735 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd47Q61735 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd47Q61735 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd47Q61735 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.07■□□□□ 0.64
Cd47Q61735 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.07■□□□□ 0.64
Cd47Q61735 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.07■□□□□ 0.64
Cd47Q61735 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd47Q61735 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cd47Q61735 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.07■□□□□ 0.64
Cd47Q61735 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Cd47Q61735 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.07■□□□□ 0.64
Cd47Q61735 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.07■□□□□ 0.64
Cd47Q61735 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd47Q61735 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Cd47Q61735 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cd47Q61735 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd47Q61735 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd47Q61735 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms