Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Foxc1Q61572 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Foxc1Q61572 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Foxc1Q61572 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Foxc1Q61572 Gm15039-201ENSMUST00000118914 875 ntBASIC15.36■□□□□ 0.05
Foxc1Q61572 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Foxc1Q61572 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Foxc1Q61572 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Foxc1Q61572 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxc1Q61572 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxc1Q61572 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxc1Q61572 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.35■□□□□ 0.05
Foxc1Q61572 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxc1Q61572 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.34■□□□□ 0.05
Foxc1Q61572 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Foxc1Q61572 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Foxc1Q61572 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxc1Q61572 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Foxc1Q61572 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Foxc1Q61572 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxc1Q61572 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxc1Q61572 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Foxc1Q61572 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Foxc1Q61572 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxc1Q61572 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Foxc1Q61572 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Foxc1Q61572 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.32■□□□□ 0.04
Foxc1Q61572 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Foxc1Q61572 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.32■□□□□ 0.04
Foxc1Q61572 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxc1Q61572 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Foxc1Q61572 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxc1Q61572 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.31■□□□□ 0.04
Foxc1Q61572 Gm13238-201ENSMUST00000117655 780 ntBASIC15.31■□□□□ 0.04
Foxc1Q61572 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.31■□□□□ 0.04
Foxc1Q61572 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxc1Q61572 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxc1Q61572 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxc1Q61572 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxc1Q61572 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxc1Q61572 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Foxc1Q61572 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.3■□□□□ 0.04
Foxc1Q61572 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Foxc1Q61572 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxc1Q61572 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Foxc1Q61572 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Foxc1Q61572 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Foxc1Q61572 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Foxc1Q61572 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxc1Q61572 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Foxc1Q61572 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Foxc1Q61572 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxc1Q61572 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Foxc1Q61572 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.27■□□□□ 0.04
Foxc1Q61572 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxc1Q61572 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms