Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.85■□□□□ 0.93
Sim2Q61079 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sim2Q61079 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sim2Q61079 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sim2Q61079 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sim2Q61079 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.83■□□□□ 0.93
Sim2Q61079 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Sim2Q61079 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.83■□□□□ 0.93
Sim2Q61079 Gm43137-201ENSMUST00000198052 594 ntBASIC20.83■□□□□ 0.93
Sim2Q61079 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sim2Q61079 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sim2Q61079 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sim2Q61079 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.82■□□□□ 0.92
Sim2Q61079 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.81■□□□□ 0.92
Sim2Q61079 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sim2Q61079 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Gm43017-201ENSMUST00000198296 752 ntBASIC20.81■□□□□ 0.92
Sim2Q61079 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
Sim2Q61079 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sim2Q61079 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sim2Q61079 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sim2Q61079 Mir7075-201ENSMUST00000184187 82 ntBASIC20.8■□□□□ 0.92
Sim2Q61079 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.8■□□□□ 0.92
Sim2Q61079 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sim2Q61079 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sim2Q61079 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sim2Q61079 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sim2Q61079 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sim2Q61079 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sim2Q61079 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sim2Q61079 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sim2Q61079 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Sim2Q61079 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Gm5874-201ENSMUST00000096101 508 ntBASIC20.78■□□□□ 0.92
Sim2Q61079 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sim2Q61079 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sim2Q61079 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sim2Q61079 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sim2Q61079 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sim2Q61079 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Sim2Q61079 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sim2Q61079 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sim2Q61079 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sim2Q61079 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
Sim2Q61079 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sim2Q61079 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sim2Q61079 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sim2Q61079 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.76■□□□□ 0.91
Sim2Q61079 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.76■□□□□ 0.91
Sim2Q61079 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sim2Q61079 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sim2Q61079 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sim2Q61079 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Sim2Q61079 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sim2Q61079 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sim2Q61079 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.74■□□□□ 0.91
Sim2Q61079 Gm9870-201ENSMUST00000063874 645 ntBASIC20.74■□□□□ 0.91
Sim2Q61079 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sim2Q61079 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sim2Q61079 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sim2Q61079 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sim2Q61079 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sim2Q61079 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.73■□□□□ 0.91
Sim2Q61079 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sim2Q61079 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sim2Q61079 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sim2Q61079 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sim2Q61079 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sim2Q61079 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.71■□□□□ 0.91
Sim2Q61079 Gm8493-201ENSMUST00000196881 489 ntBASIC20.71■□□□□ 0.91
Sim2Q61079 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sim2Q61079 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.7■□□□□ 0.9
Sim2Q61079 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms