Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxd3Q61060 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxd3Q61060 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd3Q61060 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd3Q61060 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd3Q61060 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd3Q61060 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxd3Q61060 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Foxd3Q61060 Gm10420-201ENSMUST00000121713 882 ntBASIC19.3■□□□□ 0.68
Foxd3Q61060 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.29■□□□□ 0.68
Foxd3Q61060 Gm5812-201ENSMUST00000061073 957 ntBASIC19.29■□□□□ 0.68
Foxd3Q61060 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxd3Q61060 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd3Q61060 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd3Q61060 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd3Q61060 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.28■□□□□ 0.68
Foxd3Q61060 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Foxd3Q61060 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxd3Q61060 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd3Q61060 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxd3Q61060 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Foxd3Q61060 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxd3Q61060 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.26■□□□□ 0.67
Foxd3Q61060 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxd3Q61060 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxd3Q61060 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxd3Q61060 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Foxd3Q61060 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
Foxd3Q61060 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxd3Q61060 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Foxd3Q61060 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Foxd3Q61060 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Foxd3Q61060 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxd3Q61060 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxd3Q61060 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxd3Q61060 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxd3Q61060 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Foxd3Q61060 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxd3Q61060 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
Foxd3Q61060 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Foxd3Q61060 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxd3Q61060 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxd3Q61060 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Foxd3Q61060 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxd3Q61060 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Foxd3Q61060 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxd3Q61060 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Foxd3Q61060 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Foxd3Q61060 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxd3Q61060 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxd3Q61060 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxd3Q61060 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxd3Q61060 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Foxd3Q61060 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Foxd3Q61060 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Foxd3Q61060 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Foxd3Q61060 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.21■□□□□ 0.67
Foxd3Q61060 Gm5921-201ENSMUST00000075898 882 ntBASIC19.21■□□□□ 0.67
Foxd3Q61060 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Foxd3Q61060 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd3Q61060 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.21■□□□□ 0.67
Foxd3Q61060 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.2■□□□□ 0.66
Foxd3Q61060 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Foxd3Q61060 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Foxd3Q61060 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd3Q61060 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Foxd3Q61060 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms