Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Slc6a4Q60857 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc6a4Q60857 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
Slc6a4Q60857 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a4Q60857 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc6a4Q60857 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a4Q60857 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a4Q60857 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a4Q60857 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.8■■□□□ 1.08
Slc6a4Q60857 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a4Q60857 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a4Q60857 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a4Q60857 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a4Q60857 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a4Q60857 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Slc6a4Q60857 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.77■■□□□ 1.08
Slc6a4Q60857 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a4Q60857 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a4Q60857 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.75■■□□□ 1.07
Slc6a4Q60857 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a4Q60857 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Gm22238-201ENSMUST00000175222 88 ntBASIC21.74■■□□□ 1.07
Slc6a4Q60857 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a4Q60857 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a4Q60857 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a4Q60857 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.72■■□□□ 1.07
Slc6a4Q60857 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.72■■□□□ 1.07
Slc6a4Q60857 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a4Q60857 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a4Q60857 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a4Q60857 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a4Q60857 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc6a4Q60857 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.7■■□□□ 1.06
Slc6a4Q60857 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a4Q60857 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a4Q60857 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.69■■□□□ 1.06
Slc6a4Q60857 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.69■■□□□ 1.06
Slc6a4Q60857 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.69■■□□□ 1.06
Slc6a4Q60857 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms