Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col12a1Q60847 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col12a1Q60847 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.55■■□□□ 1.04
Col12a1Q60847 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col12a1Q60847 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col12a1Q60847 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Col12a1Q60847 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col12a1Q60847 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Col12a1Q60847 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col12a1Q60847 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.53■■□□□ 1.04
Col12a1Q60847 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col12a1Q60847 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col12a1Q60847 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Col12a1Q60847 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Col12a1Q60847 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col12a1Q60847 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Col12a1Q60847 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col12a1Q60847 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col12a1Q60847 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.52■■□□□ 1.04
Col12a1Q60847 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col12a1Q60847 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col12a1Q60847 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col12a1Q60847 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col12a1Q60847 Gm42569-201ENSMUST00000200539 472 ntBASIC21.51■■□□□ 1.03
Col12a1Q60847 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col12a1Q60847 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.5■■□□□ 1.03
Col12a1Q60847 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col12a1Q60847 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col12a1Q60847 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col12a1Q60847 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col12a1Q60847 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col12a1Q60847 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col12a1Q60847 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Col12a1Q60847 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.49■■□□□ 1.03
Col12a1Q60847 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Gm43173-201ENSMUST00000202246 593 ntBASIC21.49■■□□□ 1.03
Col12a1Q60847 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.49■■□□□ 1.03
Col12a1Q60847 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Col12a1Q60847 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col12a1Q60847 Spcs1-204ENSMUST00000226782 949 ntBASIC21.48■■□□□ 1.03
Col12a1Q60847 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.48■■□□□ 1.03
Col12a1Q60847 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col12a1Q60847 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col12a1Q60847 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Col12a1Q60847 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col12a1Q60847 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.47■■□□□ 1.03
Col12a1Q60847 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col12a1Q60847 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Col12a1Q60847 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col12a1Q60847 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Col12a1Q60847 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col12a1Q60847 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Col12a1Q60847 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col12a1Q60847 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col12a1Q60847 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col12a1Q60847 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.46■■□□□ 1.03
Col12a1Q60847 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Col12a1Q60847 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col12a1Q60847 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col12a1Q60847 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col12a1Q60847 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col12a1Q60847 Gm10493-201ENSMUST00000097270 612 ntBASIC21.45■■□□□ 1.02
Col12a1Q60847 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col12a1Q60847 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col12a1Q60847 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col12a1Q60847 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col12a1Q60847 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Gm8493-201ENSMUST00000196881 489 ntBASIC21.44■■□□□ 1.02
Col12a1Q60847 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.44■■□□□ 1.02
Col12a1Q60847 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col12a1Q60847 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col12a1Q60847 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col12a1Q60847 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col12a1Q60847 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Col12a1Q60847 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.42■■□□□ 1.02
Col12a1Q60847 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms