Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ubr3Q5U430 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Ubr3Q5U430 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.55■■□□□ 1.84
Ubr3Q5U430 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Ubr3Q5U430 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr3Q5U430 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr3Q5U430 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr3Q5U430 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ubr3Q5U430 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.53■■□□□ 1.84
Ubr3Q5U430 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.53■■□□□ 1.84
Ubr3Q5U430 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr3Q5U430 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr3Q5U430 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ubr3Q5U430 Gm12251-201ENSMUST00000117893 792 ntBASIC26.53■■□□□ 1.84
Ubr3Q5U430 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ubr3Q5U430 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr3Q5U430 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr3Q5U430 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr3Q5U430 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.52■■□□□ 1.84
Ubr3Q5U430 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Ubr3Q5U430 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ubr3Q5U430 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.51■■□□□ 1.83
Ubr3Q5U430 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr3Q5U430 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr3Q5U430 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr3Q5U430 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr3Q5U430 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ubr3Q5U430 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.49■■□□□ 1.83
Ubr3Q5U430 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Ubr3Q5U430 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Ubr3Q5U430 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ubr3Q5U430 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ubr3Q5U430 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr3Q5U430 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr3Q5U430 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr3Q5U430 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr3Q5U430 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ubr3Q5U430 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC26.47■■□□□ 1.83
Ubr3Q5U430 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr3Q5U430 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ubr3Q5U430 Gm43173-201ENSMUST00000202246 593 ntBASIC26.46■■□□□ 1.83
Ubr3Q5U430 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ubr3Q5U430 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.45■■□□□ 1.83
Ubr3Q5U430 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Gm26571-201ENSMUST00000181399 666 ntBASIC26.45■■□□□ 1.82
Ubr3Q5U430 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ubr3Q5U430 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Ubr3Q5U430 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr3Q5U430 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubr3Q5U430 Mir7075-201ENSMUST00000184187 82 ntBASIC26.42■■□□□ 1.82
Ubr3Q5U430 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC26.42■■□□□ 1.82
Ubr3Q5U430 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.42■■□□□ 1.82
Ubr3Q5U430 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ubr3Q5U430 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.41■■□□□ 1.82
Ubr3Q5U430 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr3Q5U430 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.41■■□□□ 1.82
Ubr3Q5U430 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.41■■□□□ 1.82
Ubr3Q5U430 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr3Q5U430 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubr3Q5U430 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
Ubr3Q5U430 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ubr3Q5U430 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ubr3Q5U430 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ubr3Q5U430 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ubr3Q5U430 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ubr3Q5U430 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ubr3Q5U430 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.38■■□□□ 1.81
Ubr3Q5U430 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.38■■□□□ 1.81
Ubr3Q5U430 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ubr3Q5U430 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.37■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms