Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf43Q5NCP0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf43Q5NCP0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf43Q5NCP0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf43Q5NCP0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf43Q5NCP0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.63■■□□□ 1.05
Rnf43Q5NCP0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf43Q5NCP0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf43Q5NCP0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf43Q5NCP0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf43Q5NCP0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.6■■□□□ 1.05
Rnf43Q5NCP0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rnf43Q5NCP0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf43Q5NCP0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf43Q5NCP0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf43Q5NCP0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rnf43Q5NCP0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.58■■□□□ 1.05
Rnf43Q5NCP0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf43Q5NCP0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf43Q5NCP0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rnf43Q5NCP0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.58■■□□□ 1.04
Rnf43Q5NCP0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf43Q5NCP0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf43Q5NCP0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rnf43Q5NCP0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf43Q5NCP0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf43Q5NCP0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf43Q5NCP0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf43Q5NCP0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rnf43Q5NCP0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf43Q5NCP0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf43Q5NCP0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf43Q5NCP0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf43Q5NCP0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf43Q5NCP0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf43Q5NCP0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf43Q5NCP0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf43Q5NCP0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf43Q5NCP0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf43Q5NCP0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf43Q5NCP0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rnf43Q5NCP0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf43Q5NCP0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf43Q5NCP0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf43Q5NCP0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf43Q5NCP0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms