Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf20Q5DTM8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf20Q5DTM8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf20Q5DTM8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf20Q5DTM8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf20Q5DTM8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf20Q5DTM8 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.19■■□□□ 1.62
Rnf20Q5DTM8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rnf20Q5DTM8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rnf20Q5DTM8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rnf20Q5DTM8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
Rnf20Q5DTM8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.18■■□□□ 1.62
Rnf20Q5DTM8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rnf20Q5DTM8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf20Q5DTM8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Rnf20Q5DTM8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.16■■□□□ 1.62
Rnf20Q5DTM8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf20Q5DTM8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Rnf20Q5DTM8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf20Q5DTM8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rnf20Q5DTM8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Rnf20Q5DTM8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.14■■□□□ 1.62
Rnf20Q5DTM8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf20Q5DTM8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf20Q5DTM8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf20Q5DTM8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf20Q5DTM8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf20Q5DTM8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Rnf20Q5DTM8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf20Q5DTM8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Gm45444-201ENSMUST00000211394 898 ntBASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.11■■□□□ 1.61
Rnf20Q5DTM8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25.1■■□□□ 1.61
Rnf20Q5DTM8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms