Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Defb28Q3V2L0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Defb28Q3V2L0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.7■□□□□ 0.9
Defb28Q3V2L0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Defb28Q3V2L0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Defb28Q3V2L0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Defb28Q3V2L0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Defb28Q3V2L0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Defb28Q3V2L0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Defb28Q3V2L0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.69■□□□□ 0.9
Defb28Q3V2L0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.69■□□□□ 0.9
Defb28Q3V2L0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Defb28Q3V2L0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Defb28Q3V2L0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.68■□□□□ 0.9
Defb28Q3V2L0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb28Q3V2L0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Defb28Q3V2L0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.68■□□□□ 0.9
Defb28Q3V2L0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
Defb28Q3V2L0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb28Q3V2L0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb28Q3V2L0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
Defb28Q3V2L0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.65■□□□□ 0.9
Defb28Q3V2L0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.65■□□□□ 0.9
Defb28Q3V2L0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb28Q3V2L0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.64■□□□□ 0.9
Defb28Q3V2L0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Defb28Q3V2L0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Defb28Q3V2L0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Defb28Q3V2L0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Defb28Q3V2L0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Defb28Q3V2L0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Defb28Q3V2L0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb28Q3V2L0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.62■□□□□ 0.89
Defb28Q3V2L0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb28Q3V2L0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb28Q3V2L0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Defb28Q3V2L0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Defb28Q3V2L0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.61■□□□□ 0.89
Defb28Q3V2L0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb28Q3V2L0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb28Q3V2L0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Defb28Q3V2L0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.6■□□□□ 0.89
Defb28Q3V2L0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.6■□□□□ 0.89
Defb28Q3V2L0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Defb28Q3V2L0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb28Q3V2L0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Gm7291-201ENSMUST00000199147 382 ntBASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Defb28Q3V2L0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Defb28Q3V2L0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Defb28Q3V2L0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Defb28Q3V2L0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Defb28Q3V2L0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Defb28Q3V2L0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Defb28Q3V2L0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Defb28Q3V2L0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Defb28Q3V2L0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms