Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn4Q3UWL8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn4Q3UWL8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn4Q3UWL8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Scarna2-201ENSMUST00000157560 414 ntBASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn4Q3UWL8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn4Q3UWL8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Gm9806-201ENSMUST00000051080 552 ntBASIC20.58■□□□□ 0.89
Pfdn4Q3UWL8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn4Q3UWL8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn4Q3UWL8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn4Q3UWL8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pfdn4Q3UWL8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.57■□□□□ 0.88
Pfdn4Q3UWL8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn4Q3UWL8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn4Q3UWL8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn4Q3UWL8 Gm16437-201ENSMUST00000025669 507 ntBASIC20.56■□□□□ 0.88
Pfdn4Q3UWL8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn4Q3UWL8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn4Q3UWL8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Gm11687-201ENSMUST00000118911 886 ntBASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pfdn4Q3UWL8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn4Q3UWL8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.54■□□□□ 0.88
Pfdn4Q3UWL8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn4Q3UWL8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pfdn4Q3UWL8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.53■□□□□ 0.88
Pfdn4Q3UWL8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pfdn4Q3UWL8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Pfdn4Q3UWL8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn4Q3UWL8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn4Q3UWL8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn4Q3UWL8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pfdn4Q3UWL8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms