Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Foxr1Q3UTB7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.69■■□□□ 1.06
Foxr1Q3UTB7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxr1Q3UTB7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Foxr1Q3UTB7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxr1Q3UTB7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxr1Q3UTB7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.68■■□□□ 1.06
Foxr1Q3UTB7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Foxr1Q3UTB7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxr1Q3UTB7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Foxr1Q3UTB7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxr1Q3UTB7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.65■■□□□ 1.06
Foxr1Q3UTB7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxr1Q3UTB7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Foxr1Q3UTB7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Foxr1Q3UTB7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Foxr1Q3UTB7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxr1Q3UTB7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxr1Q3UTB7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.62■■□□□ 1.05
Foxr1Q3UTB7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxr1Q3UTB7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxr1Q3UTB7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Foxr1Q3UTB7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxr1Q3UTB7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxr1Q3UTB7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Foxr1Q3UTB7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Gm9847-201ENSMUST00000052528 599 ntBASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Gm13241-201ENSMUST00000094493 780 ntBASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxr1Q3UTB7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Foxr1Q3UTB7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Foxr1Q3UTB7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Foxr1Q3UTB7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Foxr1Q3UTB7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Gm12922-201ENSMUST00000120626 809 ntBASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Foxr1Q3UTB7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxr1Q3UTB7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Foxr1Q3UTB7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxr1Q3UTB7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.56■■□□□ 1.04
Foxr1Q3UTB7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxr1Q3UTB7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.55■■□□□ 1.04
Foxr1Q3UTB7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxr1Q3UTB7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms