Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcbP82349 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcbP82349 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SgcbP82349 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcbP82349 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SgcbP82349 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SgcbP82349 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
SgcbP82349 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SgcbP82349 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SgcbP82349 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SgcbP82349 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SgcbP82349 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcbP82349 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcbP82349 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcbP82349 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcbP82349 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcbP82349 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcbP82349 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcbP82349 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcbP82349 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SgcbP82349 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcbP82349 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcbP82349 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SgcbP82349 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.82■□□□□ 0.6
SgcbP82349 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcbP82349 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcbP82349 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.81■□□□□ 0.6
SgcbP82349 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.81■□□□□ 0.6
SgcbP82349 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.81■□□□□ 0.6
SgcbP82349 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SgcbP82349 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SgcbP82349 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.8■□□□□ 0.6
SgcbP82349 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SgcbP82349 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcbP82349 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SgcbP82349 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SgcbP82349 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SgcbP82349 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.79■□□□□ 0.6
SgcbP82349 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SgcbP82349 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.79■□□□□ 0.6
SgcbP82349 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SgcbP82349 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SgcbP82349 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SgcbP82349 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SgcbP82349 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SgcbP82349 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SgcbP82349 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SgcbP82349 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.76■□□□□ 0.59
SgcbP82349 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.76■□□□□ 0.59
SgcbP82349 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.76■□□□□ 0.59
SgcbP82349 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SgcbP82349 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SgcbP82349 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SgcbP82349 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcbP82349 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.75■□□□□ 0.59
SgcbP82349 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.75■□□□□ 0.59
SgcbP82349 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms