Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crnkl1P63154 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Crnkl1P63154 Mir3960-201ENSMUST00000198213 73 ntBASIC20.77■□□□□ 0.92
Crnkl1P63154 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.77■□□□□ 0.92
Crnkl1P63154 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.77■□□□□ 0.92
Crnkl1P63154 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.77■□□□□ 0.92
Crnkl1P63154 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crnkl1P63154 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Crnkl1P63154 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.76■□□□□ 0.91
Crnkl1P63154 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Crnkl1P63154 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Crnkl1P63154 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.75■□□□□ 0.91
Crnkl1P63154 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crnkl1P63154 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Crnkl1P63154 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crnkl1P63154 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.75■□□□□ 0.91
Crnkl1P63154 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Crnkl1P63154 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.74■□□□□ 0.91
Crnkl1P63154 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.74■□□□□ 0.91
Crnkl1P63154 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.74■□□□□ 0.91
Crnkl1P63154 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crnkl1P63154 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crnkl1P63154 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crnkl1P63154 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crnkl1P63154 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crnkl1P63154 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crnkl1P63154 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crnkl1P63154 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.71■□□□□ 0.91
Crnkl1P63154 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crnkl1P63154 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Crnkl1P63154 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crnkl1P63154 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Crnkl1P63154 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.7■□□□□ 0.9
Crnkl1P63154 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.7■□□□□ 0.9
Crnkl1P63154 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.69■□□□□ 0.9
Crnkl1P63154 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crnkl1P63154 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Crnkl1P63154 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Crnkl1P63154 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crnkl1P63154 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crnkl1P63154 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crnkl1P63154 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crnkl1P63154 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Crnkl1P63154 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.67■□□□□ 0.9
Crnkl1P63154 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.67■□□□□ 0.9
Crnkl1P63154 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crnkl1P63154 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Crnkl1P63154 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crnkl1P63154 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Crnkl1P63154 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Crnkl1P63154 Gm45364-201ENSMUST00000210883 159 ntBASIC20.66■□□□□ 0.9
Crnkl1P63154 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crnkl1P63154 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crnkl1P63154 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Crnkl1P63154 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crnkl1P63154 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crnkl1P63154 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Crnkl1P63154 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.65■□□□□ 0.9
Crnkl1P63154 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crnkl1P63154 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Crnkl1P63154 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms