Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Hmgcs2P54869 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Hmgcs2P54869 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hmgcs2P54869 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Hmgcs2P54869 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.84■■□□□ 1.41
Hmgcs2P54869 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs2P54869 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs2P54869 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs2P54869 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs2P54869 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.84■■□□□ 1.41
Hmgcs2P54869 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs2P54869 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgcs2P54869 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgcs2P54869 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgcs2P54869 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs2P54869 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs2P54869 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Hmgcs2P54869 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs2P54869 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs2P54869 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs2P54869 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs2P54869 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgcs2P54869 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgcs2P54869 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgcs2P54869 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgcs2P54869 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Hmgcs2P54869 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.78■■□□□ 1.4
Hmgcs2P54869 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgcs2P54869 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgcs2P54869 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
Hmgcs2P54869 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.77■■□□□ 1.4
Hmgcs2P54869 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs2P54869 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs2P54869 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs2P54869 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs2P54869 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs2P54869 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.75■■□□□ 1.39
Hmgcs2P54869 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgcs2P54869 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgcs2P54869 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.74■■□□□ 1.39
Hmgcs2P54869 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgcs2P54869 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgcs2P54869 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgcs2P54869 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.73■■□□□ 1.39
Hmgcs2P54869 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgcs2P54869 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgcs2P54869 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmgcs2P54869 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmgcs2P54869 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmgcs2P54869 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmgcs2P54869 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hmgcs2P54869 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Hmgcs2P54869 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.71■■□□□ 1.39
Hmgcs2P54869 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Hmgcs2P54869 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.71■■□□□ 1.39
Hmgcs2P54869 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Hmgcs2P54869 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Hmgcs2P54869 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.7■■□□□ 1.39
Hmgcs2P54869 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hmgcs2P54869 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Hmgcs2P54869 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs2P54869 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs2P54869 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs2P54869 Gm9870-201ENSMUST00000063874 645 ntBASIC23.7■■□□□ 1.38
Hmgcs2P54869 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs2P54869 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Hmgcs2P54869 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.7■■□□□ 1.38
Hmgcs2P54869 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.69■■□□□ 1.38
Hmgcs2P54869 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs2P54869 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs2P54869 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs2P54869 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Hmgcs2P54869 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.69■■□□□ 1.38
Hmgcs2P54869 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Hmgcs2P54869 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms