Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox1P53783 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Sox1P53783 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.06■■□□□ 1.12
Sox1P53783 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.06■■□□□ 1.12
Sox1P53783 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sox1P53783 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox1P53783 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox1P53783 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox1P53783 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.05■■□□□ 1.12
Sox1P53783 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.05■■□□□ 1.12
Sox1P53783 Gm22325-201ENSMUST00000158904 308 ntBASIC22.05■■□□□ 1.12
Sox1P53783 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Sox1P53783 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox1P53783 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox1P53783 Amer2-203ENSMUST00000225247 2662 ntBASIC22.05■■□□□ 1.12
Sox1P53783 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox1P53783 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sox1P53783 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox1P53783 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox1P53783 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox1P53783 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.03■■□□□ 1.12
Sox1P53783 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox1P53783 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sox1P53783 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Sox1P53783 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox1P53783 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.02■■□□□ 1.12
Sox1P53783 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox1P53783 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox1P53783 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sox1P53783 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox1P53783 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sox1P53783 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.02■■□□□ 1.12
Sox1P53783 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.02■■□□□ 1.12
Sox1P53783 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.02■■□□□ 1.12
Sox1P53783 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sox1P53783 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox1P53783 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox1P53783 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.01■■□□□ 1.11
Sox1P53783 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.01■■□□□ 1.11
Sox1P53783 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox1P53783 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox1P53783 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sox1P53783 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox1P53783 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox1P53783 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sox1P53783 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sox1P53783 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22■■□□□ 1.11
Sox1P53783 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22■■□□□ 1.11
Sox1P53783 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sox1P53783 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sox1P53783 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox1P53783 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox1P53783 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox1P53783 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.99■■□□□ 1.11
Sox1P53783 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox1P53783 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Sox1P53783 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox1P53783 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox1P53783 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.98■■□□□ 1.11
Sox1P53783 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox1P53783 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox1P53783 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox1P53783 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox1P53783 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox1P53783 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Sox1P53783 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox1P53783 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sox1P53783 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox1P53783 Gm12251-201ENSMUST00000117893 792 ntBASIC21.95■■□□□ 1.1
Sox1P53783 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Sox1P53783 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox1P53783 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox1P53783 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sox1P53783 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox1P53783 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox1P53783 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.94■■□□□ 1.1
Sox1P53783 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.94■■□□□ 1.1
Sox1P53783 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.94■■□□□ 1.1
Sox1P53783 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.94■■□□□ 1.1
Sox1P53783 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.94■■□□□ 1.1
Sox1P53783 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox1P53783 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox1P53783 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox1P53783 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.92■■□□□ 1.1
Sox1P53783 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sox1P53783 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.92■■□□□ 1.1
Sox1P53783 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.92■■□□□ 1.1
Sox1P53783 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox1P53783 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.92■■□□□ 1.1
Sox1P53783 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.92■■□□□ 1.1
Sox1P53783 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox1P53783 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Sox1P53783 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox1P53783 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox1P53783 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox1P53783 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.91■■□□□ 1.1
Sox1P53783 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.91■■□□□ 1.1
Sox1P53783 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox1P53783 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox1P53783 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 245.7 ms