Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Limk1P53668 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Limk1P53668 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Limk1P53668 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.75■□□□□ 0.91
Limk1P53668 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk1P53668 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk1P53668 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Limk1P53668 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.73■□□□□ 0.91
Limk1P53668 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Limk1P53668 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.73■□□□□ 0.91
Limk1P53668 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.73■□□□□ 0.91
Limk1P53668 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Limk1P53668 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Limk1P53668 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.72■□□□□ 0.91
Limk1P53668 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Limk1P53668 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.72■□□□□ 0.91
Limk1P53668 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk1P53668 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Limk1P53668 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.71■□□□□ 0.91
Limk1P53668 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Limk1P53668 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk1P53668 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
Limk1P53668 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Limk1P53668 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Limk1P53668 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Limk1P53668 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.7■□□□□ 0.9
Limk1P53668 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.7■□□□□ 0.9
Limk1P53668 Gm6139-201ENSMUST00000079261 882 ntBASIC20.7■□□□□ 0.9
Limk1P53668 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Limk1P53668 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Limk1P53668 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.69■□□□□ 0.9
Limk1P53668 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Limk1P53668 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.69■□□□□ 0.9
Limk1P53668 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.69■□□□□ 0.9
Limk1P53668 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk1P53668 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk1P53668 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Limk1P53668 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Limk1P53668 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.67■□□□□ 0.9
Limk1P53668 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
Limk1P53668 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.67■□□□□ 0.9
Limk1P53668 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Limk1P53668 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Limk1P53668 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Limk1P53668 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.66■□□□□ 0.9
Limk1P53668 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.66■□□□□ 0.9
Limk1P53668 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Limk1P53668 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Limk1P53668 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk1P53668 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
Limk1P53668 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms