Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lbx1P52955 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lbx1P52955 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.86■□□□□ 0.93
Lbx1P52955 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lbx1P52955 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lbx1P52955 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lbx1P52955 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.85■□□□□ 0.93
Lbx1P52955 Gm18671-201ENSMUST00000214826 683 ntBASIC20.85■□□□□ 0.93
Lbx1P52955 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lbx1P52955 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lbx1P52955 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lbx1P52955 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lbx1P52955 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Lbx1P52955 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.84■□□□□ 0.93
Lbx1P52955 Gm43173-201ENSMUST00000202246 593 ntBASIC20.84■□□□□ 0.93
Lbx1P52955 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.84■□□□□ 0.93
Lbx1P52955 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lbx1P52955 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lbx1P52955 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lbx1P52955 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Lbx1P52955 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lbx1P52955 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lbx1P52955 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lbx1P52955 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Lbx1P52955 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lbx1P52955 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lbx1P52955 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lbx1P52955 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lbx1P52955 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.81■□□□□ 0.92
Lbx1P52955 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.81■□□□□ 0.92
Lbx1P52955 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Gm43060-201ENSMUST00000200621 289 ntBASIC20.81■□□□□ 0.92
Lbx1P52955 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.81■□□□□ 0.92
Lbx1P52955 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lbx1P52955 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lbx1P52955 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lbx1P52955 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.8■□□□□ 0.92
Lbx1P52955 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.8■□□□□ 0.92
Lbx1P52955 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lbx1P52955 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lbx1P52955 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lbx1P52955 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lbx1P52955 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lbx1P52955 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lbx1P52955 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.79■□□□□ 0.92
Lbx1P52955 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lbx1P52955 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.78■□□□□ 0.92
Lbx1P52955 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lbx1P52955 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lbx1P52955 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lbx1P52955 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lbx1P52955 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lbx1P52955 AV356131-201ENSMUST00000206201 750 ntBASIC20.77■□□□□ 0.92
Lbx1P52955 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.77■□□□□ 0.92
Lbx1P52955 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lbx1P52955 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lbx1P52955 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Lbx1P52955 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.76■□□□□ 0.91
Lbx1P52955 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lbx1P52955 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lbx1P52955 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lbx1P52955 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lbx1P52955 Gm22240-201ENSMUST00000175225 82 ntBASIC20.75■□□□□ 0.91
Lbx1P52955 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lbx1P52955 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.75■□□□□ 0.91
Lbx1P52955 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.75■□□□□ 0.91
Lbx1P52955 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.75■□□□□ 0.91
Lbx1P52955 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lbx1P52955 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lbx1P52955 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.74■□□□□ 0.91
Lbx1P52955 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.74■□□□□ 0.91
Lbx1P52955 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lbx1P52955 Gm10653-202ENSMUST00000139570 835 ntBASIC20.73■□□□□ 0.91
Lbx1P52955 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.73■□□□□ 0.91
Lbx1P52955 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.73■□□□□ 0.91
Lbx1P52955 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.73■□□□□ 0.91
Lbx1P52955 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lbx1P52955 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.73■□□□□ 0.91
Lbx1P52955 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lbx1P52955 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lbx1P52955 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lbx1P52955 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lbx1P52955 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.71■□□□□ 0.91
Lbx1P52955 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lbx1P52955 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lbx1P52955 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lbx1P52955 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lbx1P52955 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lbx1P52955 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lbx1P52955 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Lbx1P52955 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms