Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Xcl1P47993 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.91□□□□□ -0.18
Xcl1P47993 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xcl1P47993 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Xcl1P47993 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Xcl1P47993 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xcl1P47993 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Xcl1P47993 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Xcl1P47993 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Xcl1P47993 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xcl1P47993 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Xcl1P47993 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Xcl1P47993 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC13.9□□□□□ -0.18
Xcl1P47993 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Xcl1P47993 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.9□□□□□ -0.19
Xcl1P47993 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Xcl1P47993 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Xcl1P47993 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Xcl1P47993 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Xcl1P47993 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Xcl1P47993 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.88□□□□□ -0.19
Xcl1P47993 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Xcl1P47993 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Xcl1P47993 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Xcl1P47993 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Xcl1P47993 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Xcl1P47993 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Xcl1P47993 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Xcl1P47993 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Xcl1P47993 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Xcl1P47993 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Xcl1P47993 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Xcl1P47993 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC13.86□□□□□ -0.19
Xcl1P47993 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Xcl1P47993 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Xcl1P47993 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Xcl1P47993 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Xcl1P47993 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Xcl1P47993 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Xcl1P47993 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Xcl1P47993 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms