Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfsf9P41274 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnfsf9P41274 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tnfsf9P41274 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfsf9P41274 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnfsf9P41274 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfsf9P41274 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf9P41274 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf9P41274 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf9P41274 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tnfsf9P41274 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Tnfsf9P41274 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf9P41274 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tnfsf9P41274 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf9P41274 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.21■□□□□ 0.83
Tnfsf9P41274 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tnfsf9P41274 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf9P41274 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf9P41274 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf9P41274 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf9P41274 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf9P41274 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.2■□□□□ 0.82
Tnfsf9P41274 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tnfsf9P41274 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.19■□□□□ 0.82
Tnfsf9P41274 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf9P41274 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfsf9P41274 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Gm22238-201ENSMUST00000175222 88 ntBASIC20.17■□□□□ 0.82
Tnfsf9P41274 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tnfsf9P41274 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tnfsf9P41274 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.16■□□□□ 0.82
Tnfsf9P41274 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.16■□□□□ 0.82
Tnfsf9P41274 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf9P41274 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf9P41274 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf9P41274 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Tnfsf9P41274 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfsf9P41274 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms