Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd9P40240 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cd9P40240 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd9P40240 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd9P40240 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd9P40240 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cd9P40240 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cd9P40240 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.06■□□□□ 0.96
Cd9P40240 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd9P40240 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cd9P40240 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd9P40240 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd9P40240 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.04■□□□□ 0.96
Cd9P40240 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
Cd9P40240 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cd9P40240 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.04■□□□□ 0.96
Cd9P40240 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.04■□□□□ 0.96
Cd9P40240 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cd9P40240 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.04■□□□□ 0.96
Cd9P40240 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd9P40240 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd9P40240 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd9P40240 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.03■□□□□ 0.96
Cd9P40240 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.03■□□□□ 0.96
Cd9P40240 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Cd9P40240 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd9P40240 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.02■□□□□ 0.96
Cd9P40240 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.02■□□□□ 0.96
Cd9P40240 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cd9P40240 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd9P40240 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Cd9P40240 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cd9P40240 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd9P40240 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd9P40240 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.01■□□□□ 0.95
Cd9P40240 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd9P40240 Gm5921-201ENSMUST00000075898 882 ntBASIC21.01■□□□□ 0.95
Cd9P40240 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cd9P40240 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cd9P40240 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd9P40240 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd9P40240 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd9P40240 Gm43566-201ENSMUST00000196851 808 ntBASIC20.99■□□□□ 0.95
Cd9P40240 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.99■□□□□ 0.95
Cd9P40240 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cd9P40240 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Cd9P40240 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Cd9P40240 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd9P40240 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd9P40240 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.98■□□□□ 0.95
Cd9P40240 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cd9P40240 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.98■□□□□ 0.95
Cd9P40240 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Cd9P40240 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd9P40240 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd9P40240 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd9P40240 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd9P40240 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.96■□□□□ 0.95
Cd9P40240 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd9P40240 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Cd9P40240 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cd9P40240 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd9P40240 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.94■□□□□ 0.94
Cd9P40240 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.94■□□□□ 0.94
Cd9P40240 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd9P40240 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd9P40240 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms