Protein–RNA interactions for Protein: P31695

Notch4, Neurogenic locus notch homolog protein 4, mousemouse

Predictions only

Length 1,964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch4P31695 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Notch4P31695 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Notch4P31695 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Notch4P31695 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Notch4P31695 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Notch4P31695 Gm29257-201ENSMUST00000186115 639 ntBASIC20.66■□□□□ 0.9
Notch4P31695 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch4P31695 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Notch4P31695 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.65■□□□□ 0.9
Notch4P31695 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Notch4P31695 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Notch4P31695 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Notch4P31695 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Notch4P31695 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Notch4P31695 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Notch4P31695 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Notch4P31695 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.63■□□□□ 0.89
Notch4P31695 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Gm43017-201ENSMUST00000198296 752 ntBASIC20.63■□□□□ 0.89
Notch4P31695 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.63■□□□□ 0.89
Notch4P31695 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Notch4P31695 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Notch4P31695 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Notch4P31695 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Notch4P31695 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Notch4P31695 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Notch4P31695 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Notch4P31695 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.61■□□□□ 0.89
Notch4P31695 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Notch4P31695 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 Gm43137-201ENSMUST00000198052 594 ntBASIC20.61■□□□□ 0.89
Notch4P31695 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Notch4P31695 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Notch4P31695 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.6■□□□□ 0.89
Notch4P31695 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Notch4P31695 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
Notch4P31695 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Notch4P31695 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch4P31695 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch4P31695 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Notch4P31695 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Notch4P31695 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch4P31695 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch4P31695 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Notch4P31695 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.57■□□□□ 0.88
Notch4P31695 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Notch4P31695 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Notch4P31695 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Notch4P31695 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
Notch4P31695 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Notch4P31695 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.57■□□□□ 0.88
Notch4P31695 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Notch4P31695 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Notch4P31695 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Notch4P31695 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Notch4P31695 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Notch4P31695 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.55■□□□□ 0.88
Notch4P31695 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch4P31695 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Notch4P31695 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Notch4P31695 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Notch4P31695 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Notch4P31695 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Notch4P31695 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Notch4P31695 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Notch4P31695 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.54■□□□□ 0.88
Notch4P31695 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch4P31695 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Notch4P31695 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Notch4P31695 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Notch4P31695 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Notch4P31695 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Notch4P31695 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms