Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.24■□□□□ 0.67
Cd40P27512 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.24■□□□□ 0.67
Cd40P27512 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd40P27512 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cd40P27512 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd40P27512 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.23■□□□□ 0.67
Cd40P27512 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd40P27512 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd40P27512 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cd40P27512 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd40P27512 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd40P27512 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cd40P27512 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd40P27512 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd40P27512 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cd40P27512 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd40P27512 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.22■□□□□ 0.67
Cd40P27512 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cd40P27512 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd40P27512 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd40P27512 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd40P27512 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd40P27512 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd40P27512 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.2■□□□□ 0.66
Cd40P27512 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd40P27512 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd40P27512 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd40P27512 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd40P27512 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd40P27512 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd40P27512 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd40P27512 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Cd40P27512 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd40P27512 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cd40P27512 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.17■□□□□ 0.66
Cd40P27512 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cd40P27512 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cd40P27512 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cd40P27512 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Cd40P27512 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd40P27512 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cd40P27512 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cd40P27512 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cd40P27512 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd40P27512 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cd40P27512 Gm10232-201ENSMUST00000089221 720 ntBASIC19.15■□□□□ 0.66
Cd40P27512 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.15■□□□□ 0.66
Cd40P27512 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd40P27512 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.15■□□□□ 0.66
Cd40P27512 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd40P27512 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd40P27512 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Cd40P27512 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.14■□□□□ 0.65
Cd40P27512 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cd40P27512 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd40P27512 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd40P27512 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd40P27512 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40P27512 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cd40P27512 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cd40P27512 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40P27512 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40P27512 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40P27512 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cd40P27512 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd40P27512 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd40P27512 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms