Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nfkb1P25799 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nfkb1P25799 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Nfkb1P25799 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Nfkb1P25799 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nfkb1P25799 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nfkb1P25799 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nfkb1P25799 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.77■■□□□ 1.08
Nfkb1P25799 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nfkb1P25799 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Nfkb1P25799 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nfkb1P25799 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nfkb1P25799 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.76■■□□□ 1.07
Nfkb1P25799 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nfkb1P25799 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nfkb1P25799 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nfkb1P25799 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nfkb1P25799 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nfkb1P25799 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.75■■□□□ 1.07
Nfkb1P25799 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nfkb1P25799 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nfkb1P25799 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.75■■□□□ 1.07
Nfkb1P25799 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.75■■□□□ 1.07
Nfkb1P25799 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nfkb1P25799 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Nfkb1P25799 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nfkb1P25799 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.74■■□□□ 1.07
Nfkb1P25799 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nfkb1P25799 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nfkb1P25799 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nfkb1P25799 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nfkb1P25799 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nfkb1P25799 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nfkb1P25799 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nfkb1P25799 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.72■■□□□ 1.07
Nfkb1P25799 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nfkb1P25799 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nfkb1P25799 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nfkb1P25799 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.72■■□□□ 1.07
Nfkb1P25799 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nfkb1P25799 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Nfkb1P25799 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nfkb1P25799 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nfkb1P25799 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nfkb1P25799 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nfkb1P25799 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nfkb1P25799 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nfkb1P25799 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nfkb1P25799 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.7■■□□□ 1.06
Nfkb1P25799 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nfkb1P25799 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Nfkb1P25799 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nfkb1P25799 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nfkb1P25799 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.69■■□□□ 1.06
Nfkb1P25799 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nfkb1P25799 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nfkb1P25799 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nfkb1P25799 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Nfkb1P25799 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nfkb1P25799 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nfkb1P25799 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nfkb1P25799 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nfkb1P25799 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nfkb1P25799 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Nfkb1P25799 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nfkb1P25799 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.67■■□□□ 1.06
Nfkb1P25799 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nfkb1P25799 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Nfkb1P25799 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.67■■□□□ 1.06
Nfkb1P25799 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nfkb1P25799 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nfkb1P25799 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.66■■□□□ 1.06
Nfkb1P25799 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nfkb1P25799 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.66■■□□□ 1.06
Nfkb1P25799 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nfkb1P25799 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nfkb1P25799 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nfkb1P25799 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nfkb1P25799 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nfkb1P25799 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Nfkb1P25799 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nfkb1P25799 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nfkb1P25799 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nfkb1P25799 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Nfkb1P25799 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nfkb1P25799 Gm9847-201ENSMUST00000052528 599 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms