Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.78■□□□□ 0.44
Col8a2P25318 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col8a2P25318 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col8a2P25318 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col8a2P25318 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.78■□□□□ 0.44
Col8a2P25318 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col8a2P25318 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col8a2P25318 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Col8a2P25318 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.77■□□□□ 0.44
Col8a2P25318 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col8a2P25318 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col8a2P25318 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col8a2P25318 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.77■□□□□ 0.44
Col8a2P25318 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.77■□□□□ 0.44
Col8a2P25318 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.77■□□□□ 0.44
Col8a2P25318 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.77■□□□□ 0.44
Col8a2P25318 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col8a2P25318 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col8a2P25318 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.76■□□□□ 0.43
Col8a2P25318 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.76■□□□□ 0.43
Col8a2P25318 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col8a2P25318 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col8a2P25318 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col8a2P25318 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col8a2P25318 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.75■□□□□ 0.43
Col8a2P25318 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.75■□□□□ 0.43
Col8a2P25318 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col8a2P25318 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col8a2P25318 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.74■□□□□ 0.43
Col8a2P25318 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col8a2P25318 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.74■□□□□ 0.43
Col8a2P25318 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col8a2P25318 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col8a2P25318 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col8a2P25318 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.73■□□□□ 0.43
Col8a2P25318 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.73■□□□□ 0.43
Col8a2P25318 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col8a2P25318 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col8a2P25318 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col8a2P25318 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col8a2P25318 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col8a2P25318 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.72■□□□□ 0.43
Col8a2P25318 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col8a2P25318 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col8a2P25318 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col8a2P25318 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col8a2P25318 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col8a2P25318 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.71■□□□□ 0.43
Col8a2P25318 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.71■□□□□ 0.43
Col8a2P25318 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col8a2P25318 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col8a2P25318 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col8a2P25318 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.7■□□□□ 0.42
Col8a2P25318 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.7■□□□□ 0.42
Col8a2P25318 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.7■□□□□ 0.42
Col8a2P25318 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col8a2P25318 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col8a2P25318 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col8a2P25318 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col8a2P25318 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.69■□□□□ 0.42
Col8a2P25318 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.69■□□□□ 0.42
Col8a2P25318 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col8a2P25318 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col8a2P25318 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.68■□□□□ 0.42
Col8a2P25318 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.68■□□□□ 0.42
Col8a2P25318 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.68■□□□□ 0.42
Col8a2P25318 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col8a2P25318 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col8a2P25318 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
Col8a2P25318 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col8a2P25318 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col8a2P25318 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col8a2P25318 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col8a2P25318 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.67■□□□□ 0.42
Col8a2P25318 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Col8a2P25318 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col8a2P25318 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms